Humboldt-Universität zu Berlin - Mathematisch-Naturwissenschaftliche Fakultät - Wissensmanagement in der Bioinformatik

Events organized or co-organized by members of our group.

2012

• 23.10.2012, research seminar. Anastasios Gounaris, University of Thessaloniki: Distributed Data Management: Optimization and Adaptivity Issues
• 16.7.2012, research seminar. Pablo Mendes, Freie Universität Berlin: Concept Recognition and Disambiguation
• 2.7.2012, guest lecture. Martin Althaus, Cap Gemini: Datenintegration in der Praxis
• 11.6.2012, research seminar. Feiyu Xu, DFKI Berlin: Parse Reranking for the Domain-Adaptation of Relation Extraction
• 16.3.2012, research seminar. Christian Bölling, Charite: Representation of Metabolic Pathways
• 23.1.2012, guest lecture. Nils Blüthgen, Charite Berlin: Transcription Factor Networks
• 10.1.2012, guest lecture. Hr. Dresing, Oracle: Oracle Data Integrator

2011

• 22.11.2011, guest lecture. Stefan Edlich, Beuth Hochschule Berlin: NoSQL und NewSQL
• 5.10.2011, research seminar. Anne-Lyse Minard, LIMSI Orsay: Information extraction from specialized domain
• 2.8.2011, research seminar: Saeedeh Momtazi, HPI Potsdam: Bridging the Vocabulary Gap between Questions and Answers Sentences in Question Answering Systems
• 5.7.2011, research seminar: Kai Kugler, Innsbruck: Developments in Integrative Network Biology
• 30.5.2011, research seminar: Dr. Schröder, Fraunhofer IBMT Potsdam: The CRIP Privacy Regime: A Model Concept for Networking Biobanks
• 18.3.2011, research seminar: Marie Gebhardt, MDC Berlin-Buch: Improving the prediction of miRNA function by integration of miRNA target predictions and gene regulatory networks
• 17.2.2011, research seminar: Michael Hartung, Uni Leipzig: Evolution of Ontologies in the Life Sciences
• 27.1.2011, guest lecture: Felix Naumann, HPI Potsdam: Linked Open Govermental Data
• 24.1.2011, research seminar: Ioana Manulescu, INRIA: Warehousing Web Data

2010

• 16.12.2010, research seminar: Miguel Andrade, MDC Buch. Computational approaches to the study of gene function
• 14.12.2010, guest lecture: Dr. Andreas, HU Linguistik. An Introduction t Linguistics
• 22.11.2010, research seminar: Mariana Lara Neves, Madrid. The Moara system for biomedical text mining
• 4.11.2010, research seminar: Ekaterina Buyko, Uni Jena: tba
• 18.10.2010, research seminar: Axel Rasche, MPI.MG Berlin: ARH - Alternative Splicing Robust Prediction by Entropy Complementing Differential Expression on Exon Arrays
• 11.10.2010, research seminar: Wojciech Barczynski, SAP Research Dresden: Error detection in Information Extraction Results
• 27.1.2010, guest lecture: Prof. Hans-Peter Herzel, HU Berlin und Charite: Prediction of Transcription Factor Binding Sites
• 19.1.2010, research seminar: Conrad Plake, TU Dresden: tba
• 8.1.2010, workshop: Managing and Curating Biological Pathways.

2009

• 15.12.2009, research seminar: Uwe Röhm, University of Sydney: BioSeqDB: Analyse großer DNA Datenbestände mittels deklarativer Anfragebearbeitung
• 15.12.2009, research seminar: Hilmar Schuschel, Oracle: Anwendungsintegration mit Oracle am konkreten Beispiel
• 11.12.2009, WBI Information Day: Research Topics.
• 8.12.2009, research seminar: Roman Klinger, SCAI Bonn: Conditional Random Fields for Named Entity Recognition
  
• 4.12.2009, research seminar: Marc Lohse, Max-Planck-Institute of Molecular Plant Phyiology, Potsdam: ROBIN
• 26.11.2009, dissertation defense: Philip Groth: Knowledge management and Discovery for Genotype/Phenotype Data
• 3.11.2009, research seminar: Florian Batke, Uni Tübingen: Mayday - Visual Analytics for Expression Data
  
• 11.9.2009, dissertation defense: Jörg Hakenberg: Mining Relations from the Biomedical Literature
• 12.7.2009, research seminar: Ulf Brefeld, TU Berlin: Relationship Extraction from Text
  
• 12.5.2009, Gong Show 2009.
• 24.2.2009, research seminar: Jörg Hakenberg, Arizona State University: PTQL, the Parse Tree Query Language
  
• 16.2.2009, research seminar: Falk Brauer, TU Dresden & SAP Research: Uncertainty in Named Entity Recognition
  
• 5.2.2009, guest lecture: Alexander Löser, TU Berlin: Business Intelligence over Text
  
• 15.1.2009, guest lecture: Pabst, Herrmann, Cap Gemini SD&M: Integrationsprojekte in der Praxis
  
• 12.1.2009, research seminar: Anja Klein, SAP Research Dresden: Quality in Data Streams

2008

• 1.7.2008, guest lecture: Arne Brühning, Oracle AG: Oracle Text
• 20.6.2008, research seminar: Prof. Johannes Gehrke, U Cornell: Scaling Games to Epic Dimensions
  
• 19.6.2008, research seminar: Prof. Johannes Gehrke, U Cornell: Efficient Streaming in Sensor Networks
  
• 19.6.2008, guest lecture: Prof. Anke Lüdeling, HU Berlin: Introduction into Computational Linguistics
  
• 17.6.2008, Gong Show 2008.
• 15.5.2008, research seminar: Michael Lappe, MPIMG: Systems Biology = Networks + Structures
  
• 11.4.2008 - 12.4.2008, Workshop on Information Integration Methods, Architectures, and Systems (IIMAS 2008, co-located with ICDE 2008), with Jens Dittrich, ETH Zurich, Bertram Ludaescher, University of California in Davis,  David Maier, Portland State University,Louiqa Raschid, University of Maryland
• 24.3.2008 - 28.3.2008, Dagstuhl-Seminar "Ontologies and Text Mining for Life Sciences: Current Status and Future Perspectives" (with Michael Ashburner, University of Cambridge andDr. Rebholz-Schuhmann, European Bioinformatics Institute).
• 5.2.2008, guest lecture, Prof. Antje Krause, FH Bingen: Clustering Protein Sequences.
• 22.1.2008, guest lecture, Dr. Schuchardt, MicroDiscovery GmbH: Reconstruction of Regulatory Networks.
  

2007

• 4.12.007, research seminar, Heiko Müller, University of Edinburgh: Archiving Scientific Data
  
• 1.11.007, METRIK-Seminar: Katharina Hahn, FU Berlin: Supporting Transactional Cooperation in Mobile ad-hoc Networks
  
• 19.10.2007, research seminar, Thorsten Vitt, TU Darmstadt: TextGrid - Integration in den Textwissenschaften
• 11+12.10.2007, Workshop des Graduiertenkollegs METRIK: Data and Service Management in Self-Organizing Systems
  
• 31.7.2007, research seminar, Peter Siniakov, Freie Universität Berlin: GROPUS: Adaptive Information Extraction from Text.
  
• 19.7.2007, research seminar, Prof. Klemens Böhm, Universität Karlsruhe: Towards Effective and Efficient Behavior-based Trust Models.
• 26.6.2007, guest lecture, Richard Eberl-Koschny, PSI AG: Data Warehouse Projekte in der Praxis.
  
• 26.6.2007, research seminar, Chris Bizer, FU Berlin: Neue Entwicklungen im Semantic Web.
• 30.5.2007, BCB Seminar, Humboldt Kabinett, 16.00 - 18.00 Uhr.
  
• 29.5.2007, research seminar, Stephan Gottwald, PSI AG: Informationsmanagement in Krisensituationen.
  
• 4.5.2007, Gong Show 2007.
• 27.3.2007, research seminar, Thomas Kabisch, TU Berlin: Modellierung und Lernen von Web-Interface-Patterns.
• 20.3.2007, research seminar, Toralf Kirsten, IZBI Leipzig: DWH und Mapping-basierte Datenintegration in der Bioinformatik.
  
• 6.2.2007, research seminar, Kerstin Terfloth, FU Berlin: FenceNet.
  
• 1.2.2007, guest lecture, Herr Kaselowski, SAS Deutschland: Der SAS Integration Server.
  
• 16.1.2007, guest lecture, Prof. Felix Naumann, HPI Potsdam: Schema Matching.

2006

• 30.11.2006, BCB Seminar. Falko Schreiber trägt vor über Analyse und Visualisierung biologischer Netzwerke.
• 20-22.7.2006 Data Integration for the Life Sciences, DILS06.
• 24.5.2006 BCB-Seminar im Humboldt-Kabinett.
• 13.4.2006 WBI Forschungstag von 9.00 bis ca. 15.00 Uhr im Humboldt-Kabinett Vorstellung der Arbeiten am Lehrstuhl
  Hier sind Bilder des Forschungstags zu finden.
• 9.4.2006 Workshop on Knowledge Discovery in Life Science Literature (KDLL 2006).
  In conjunction with the 10th Pacific-Asia Conference on Knowledge Discovery and Data Mining (PAKDD 2006), 9.-12.4.2006, Singapore.

2005

• 12./13.12.2005 Treffen der AG-Textmining in Berlin/Adlershof
• 25.7.2005 - 29.7.2005 Schulung der Firma Oracle für Studenten der Vorlesungen "Data Warehousing" und "Implementierung von Datenbanken".
• 25.5.2005 BCB-Seminar um 16.00 Uhr in Berlin-Adlershof.
• 15.04.2005 Tutorial in Biophysics 2005. Daniel Huson, Universität Tübingen: Algorithms for Deducing Phylogenetic Relationships. Abstract and schedule
• 07.03.2005 Vortrag von Gabriele Witterstein zum Thema: "Ein Konstruktionsalgorithmus einer persistenten Indexstruktur für Genome"
• 25.02.2005 Rolf Apweiler, EBI, will present his work about "Standardisation and Integration of Proteomics and Genomics Data".

2004

• 21.9.2004 Talk by Kevin Garwood, University of Manchester, on "Pedro: Combining Rapid Data Modelling with ontology Services in a Data Entry Activity"
• 9.9.2004 Talk by Uwe Radetzky, University of Bonn, on "Mediatorbasierte Komposition"
• 1.7.2004 Talk by Ramzi Musa, Oracle, on "ETL - Marketing Claims versus Reality"
• 21.4.2004 Excursion to the Max Planck Institute for Molecular Genetics
• 21.4.2004 BCB Seminar at Humboldt-Universität.
• 10.02.2004 Presentation by Jürgen Sühnel, IMB Jena, on "The IMB Jena Image Library of Biological Macromolecules". Institute for Computer Science, Berlin.

2003

• 10-11.12.2003 Conference on the project "Deutsch. Diachron. Digital", Berlin.
• 3.12.2003 Project presentation of the interdisciplinary research project "Linguistics, Informatics, Bioinformatics" at the Campuswoche Adlershof, Berlin.
• 27.11.2003 Tag der Wissenschaft (Scientific day) of the Center for Biophysics and Bioinformatics of Humboldt-Universität, Berlin.
• 3-14.11.2003 EMBO practical course in Bioinformatics, "Data Mining and Genome Sequence Analysis", Lima, Peru.
• 22.9.2003 Workshop on Data and Text Mining in Bioinformatics, Cavtat, Croatia (in conjunction with ECML/PKDD 2003).
• 8-12.9.2003 Conference on Very Large Databases, Berlin.
• 7.5.2003 BCB Seminar at Humboldt-Universität.