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- 2008-03-17: Added support for regulatory pathways from KEGG with original KEGG layout
- 2007-12-12: Switched to the new 2008 version of MeSH (cells, tissues, diseases)
- 2007-11-01: Ali Baba now also searches for drugs from DrugBank
- 2007-10-01: Web services provided to the BCMS project by Biotec TU Dresden and Ali Baba
- 2007-09-18: Save graphs as images: File|Save as image...
- 2007-07-04: Ali Baba features an automated query expansion for proteins
- 2007-06-18: Query Ali Baba using UniProt IDs instead of keywords
- 2007-12-12: Switched to the new 2008 version of MeSH (cells, tissues, diseases)
- 2007-11-01: Ali Baba now also searches for drugs from DrugBank
- 2007-10-01: Web services provided to the BCMS project by Biotec TU Dresden and Ali Baba
- 2007-09-18: Save graphs as images: File|Save as image...
- 2007-07-04: Ali Baba features an automated query expansion for proteins
- 2007-06-18: Query Ali Baba using UniProt IDs instead of keywords
- 2007-06-12: Load KEGG pathways into Ali Baba from the KEGG server
- 2007-01-05: Support for PubMed's Related Articles functionality
- 2006-12-20: Load KEGG graphs and compare them to results found by Ali Baba
- 2006-12-15: Ali Baba now features editing of graphs: add/remove nodes and edges
- 2006-06-01: A version customized for nutrigenomics is now available
- 2006-05-31: We added a feedback modus to report on falsely recognized entities
- 2006-05-20: Path length filter: reduce graph by limiting max. path length from a selected node (Menu:View|Layout|Path length)
- 2006-05-11: Added pattern matching for cellular location of proteins
- 2006-05-03: View initial PubMed results: select "Texts" in the information panel; (View|Tree view only) shows textual information only, (Graph view only) shows only the graph
- 2006-04-13: Check out the radial view! (Menu:View|Layout|Radial)
- 2006-03-27: Ali Baba is now available as a Java Web Start application
